Independent scientific research & technology servicesLos Angeles, California
ADVANCING COMPUTATIONAL LIFE SCIENCES

Complex biological data.
Clearer paths to discovery.

AMS Bioinformatics LLC connects rigorous bioinformatics, data science and scientific software to help research teams explore the biology behind disease.

Cancer genomics Multi-omics Research AI
BIOMEDICAL RESEARCHSCIENTIFIC COMPUTINGTRANSLATIONAL DISCOVERY
01 / WHAT WE DO

Expertise across the research lifecycle.

From raw sequencing data to computational models and reproducible software, our service areas support exploratory research and scientific decision-making.

01⌁

NGS & cancer genomics

Sequencing workflows for the discovery and characterization of genetic variation in cancer and other biological research.

  • WES/WGS processing and variant analysis
  • Quality control, filtering and annotation
  • Cancer-associated mutation exploration
02≋

Transcriptomics & single-cell

Turn gene-expression measurements into interpretable molecular patterns, with attention to statistical design and technical variation.

  • Bulk RNA-seq and differential expression
  • Single-cell RNA-seq exploratory analysis
  • Normalization, batch effects and QC
03◇

Multi-omics integration

Combine complementary molecular data layers to investigate disease biology, pathways and research hypotheses.

  • Genomics, transcriptomics and proteomics
  • Feature integration and biomarker exploration
  • Systems biology and network analysis
04✳

Machine learning & research AI

Develop and assess interpretable computational models for complex biological datasets without overclaiming predictive performance.

  • Feature selection and predictive modeling
  • Deep learning for biological signals
  • Cross-validation and model evaluation
05◎

Functional genomics

Explore relationships between sequence features, gene regulation and biological function using computational approaches.

  • Gene regulation and enhancer analysis
  • Sequence-based predictive methods
  • Pathway and regulatory interpretation
06⬡

Computational drug discovery

Support early-stage, hypothesis-generating discovery with molecular modeling and transparent computational assessments.

  • Structure- and ligand-based approaches
  • Molecular docking and virtual screening
  • Candidate triage and research prioritization
07{ }

Scientific software & workflows

Build maintainable research tools that make analyses easier to reproduce, inspect and share across teams.

  • Python/R scientific software development
  • NGS pipelines and workflow automation
  • Interactive dashboards and visualization
08☷

Cloud & large-scale bioinformatics

Plan computational approaches for data-intensive research, considering cost, reproducibility and practical deployment needs.

  • Cloud/HPC workflow architecture
  • Scalable data handling and orchestration
  • Reproducible environments and provenance
09↗

Research consulting & ML evaluation

Translate scientific questions into feasible analysis plans and assess tools for research teams.

  • Experimental design and statistical strategy
  • No-code/low-code ML tool evaluation
  • Methods review and technical guidance

Services are scoped to each project, available data, and research requirements. Computational findings require appropriate independent validation before clinical, regulatory or therapeutic use.

RESEARCH-FIRST THINKING

Science-driven. Software-enabled.

We bring computational rigor to challenging research questions, emphasizing quality controls, transparent assumptions and handoffs that researchers can actually use.

How we approach projects
01

Data quality first

Traceable processing, normalization choices and quality checks.

02

Interpretable analysis

Clear methods, evidence, assumptions and limitations.

03

Reproducible delivery

Shareable code, documentation and practical research outputs.

02 / IN DEVELOPMENT
EARLY-STAGE R&D

Introducing CancerAI.

An emerging research software concept for exploring cancer multi-omics data, molecular subtypes and testable biological hypotheses.

Our initial development direction focuses on breast cancer research, combining gene expression and copy-number information with molecular subtype annotations to support transparent, reproducible exploratory analysis.

CancerAI is a prototype-stage initiative. The research workflow is under development and has not been validated for clinical applications, biomarker confirmation, or treatment selection.

Explore research collaboration
✳
CancerAI / CONCEPT WORKFLOWBreast cancer multi-omics explorer
R&D
01ExpressionRNA profiles
02Copy numberGenomic alterations
03SubtypesResearch labels
CancerAIRESEARCH
03 / HOW WE WORK

From scientific question to reproducible result.

Whether you need focused consultation or a custom computational workflow, the engagement begins with a clear scientific objective.

01

Define the question

Clarify the research objective, data types, constraints, milestones and appropriate success criteria.

02

Audit the data

Review provenance, quality, experimental design, normalization and limitations before modeling.

03

Analyze & iterate

Build transparent computational workflows, compare methods and document key decisions.

04

Deliver for reuse

Provide agreed reports, code, figures and documentation that support further research.

WHO WE WORK WITH

Built for collaborative science.

Academic laboratoriesBiotechnology teamsTranslational researchersScientific software groupsGovernment research programs (prospective)
INDEPENDENT · LOS ANGELES, CA
AMS Bioinformatics LLC logo and Data Discovery Healthier Tomorrow tagline

DATA · DISCOVERY · HEALTHIER TOMORROW

04 / ABOUT AMS

Bioinformatics with a discovery mindset.

AMS Bioinformatics LLC is a California-based business focused on bioinformatics consulting, scientific computing and computational biology research and development.

Our direction combines research services with the development of reproducible software products. CancerAI is our early-stage initiative exploring how data integration and computational tools can support cancer research.

Los Angeles, California

05 / LET'S CONNECT

Have a biological question that needs a computational answer?

Let's discuss your research goals, datasets and what a thoughtful analysis or software collaboration could look like.

DIRECT CONTACT · FOUNDER & CEO[email protected] Los Angeles, California
Project inquiry

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